wikiq mostly functional, but reverters take all the credit for the content they restore.

This commit is contained in:
Nathan TeBlunthuis 2018-12-11 19:36:49 -08:00
parent 0c2d72b881
commit 26ea272114
2 changed files with 252 additions and 180 deletions

View File

@ -16,43 +16,99 @@ from io import StringIO
# wikia and wikipedia data DONE
# malformed xmls DONE
# class Test_Persistence_Bug(unittest.TestCase):
class Test_Persistence(unittest.TestCase):
# def setUp(self):
# if not os.path.exists("test_output"):
# os.mkdir("test_output")
def setUp(self):
if not os.path.exists("test_output"):
os.mkdir("test_output")
# self.wiki = 'enwiki-test'
# self.wikiq_out_name = self.wiki + ".tsv"
# self.test_output_dir = os.path.join(".", "test_output")
# self.call_output = os.path.join(self.test_output_dir, self.wikiq_out_name)
self.wiki = 'pwr-test'
self.wikiq_out_name = self.wiki + ".tsv"
self.test_output_dir = os.path.join(".", "test_output")
self.call_output = os.path.join(self.test_output_dir, self.wikiq_out_name)
# self.infile = "{0}.xml".format(self.wiki)
# self.base_call = "../wikiq {0} -o {1}"
# self.input_dir = "dumps"
# self.input_file = os.path.join(".", self.input_dir,self.infile)
# self.baseline_output_dir = "baseline_output"
self.infile = "{0}.xml".format(self.wiki)
self.base_call = "../wikiq {0} -o {1}"
self.input_dir = "dumps"
self.input_file = os.path.join(".", self.input_dir,self.infile)
self.baseline_output_dir = "baseline_output"
# def test_segment_persistence(self):
# test_filename = "sequence-" + self.wikiq_out_name
# test_file = os.path.join(self.test_output_dir, test_filename)
# if os.path.exists(test_file):
# os.remove(test_file)
def test_sequence_persistence(self):
test_filename = "sequence-" + self.wikiq_out_name
test_file = os.path.join(self.test_output_dir, test_filename)
if os.path.exists(test_file):
os.remove(test_file)
# call = self.base_call.format(self.input_file, self.test_output_dir)
# call = call + " --url-encode --persistence sequence --collapse-user"
# print(os.path.abspath('.'))
# print(call)
# proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
# proc.wait()
call = self.base_call.format(self.input_file, self.test_output_dir)
call = call + " --url-encode --persistence sequence --collapse-user"
print(os.path.abspath('.'))
print(call)
proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
proc.wait()
# copyfile(self.call_output, test_file)
# baseline_file = os.path.join(".", self.baseline_output_dir, test_filename)
copyfile(self.call_output, test_file)
baseline_file = os.path.join(".", self.baseline_output_dir, test_filename)
# # as a test let's make sure that we get equal data frames
# test = pd.read_table(test_file)
# baseline = pd.read_table(baseline_file)
# assert_frame_equal(test,baseline)
# as a test let's make sure that we get equal data frames
test = pd.read_table(test_file)
self.assertEqual(test['tokens_added'][0],4)
self.assertEqual(test['tokens_added'][1],5)
self.assertEqual(test['tokens_added'][2],0)
self.assertEqual(test['tokens_added'][3],6)
self.assertEqual(test['tokens_added'][4],4)
self.assertEqual(test['tokens_removed'][0],0)
self.assertEqual(test['tokens_removed'][1],0)
self.assertEqual(test['tokens_removed'][2],5)
self.assertEqual(test['tokens_removed'][3],4)
self.assertEqual(test['tokens_removed'][4],6)
self.assertEqual(test['token_revs'][0],4*3)
self.assertEqual(test['token_revs'][1],0)
self.assertEqual(test['token_revs'][2],0)
self.assertEqual(test['token_revs'][3],0)
self.assertEqual(test['token_revs'][4],0)
baseline = pd.read_table(baseline_file)
assert_frame_equal(test,baseline)
class Test_Persistence_Bug(unittest.TestCase):
def setUp(self):
if not os.path.exists("test_output"):
os.mkdir("test_output")
self.wiki = 'enwiki-test'
self.wikiq_out_name = self.wiki + ".tsv"
self.test_output_dir = os.path.join(".", "test_output")
self.call_output = os.path.join(self.test_output_dir, self.wikiq_out_name)
self.infile = "{0}.xml".format(self.wiki)
self.base_call = "../wikiq {0} -o {1}"
self.input_dir = "dumps"
self.input_file = os.path.join(".", self.input_dir,self.infile)
self.baseline_output_dir = "baseline_output"
def test_sequence_persistence(self):
test_filename = "sequence-" + self.wikiq_out_name
test_file = os.path.join(self.test_output_dir, test_filename)
if os.path.exists(test_file):
os.remove(test_file)
call = self.base_call.format(self.input_file, self.test_output_dir)
call = call + " --url-encode --persistence sequence --collapse-user"
print(os.path.abspath('.'))
print(call)
proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
proc.wait()
copyfile(self.call_output, test_file)
baseline_file = os.path.join(".", self.baseline_output_dir, test_filename)
# as a test let's make sure that we get equal data frames
test = pd.read_table(test_file)
baseline = pd.read_table(baseline_file)
assert_frame_equal(test,baseline)
class Test_Wikipedia(unittest.TestCase):
@ -103,7 +159,7 @@ class Test_Wikipedia(unittest.TestCase):
print(call)
proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
proc.wait()
# copyfile(self.call_output, test_file)
copyfile(self.call_output, test_file)
baseline_file = os.path.join(os.path.abspath("."), self.baseline_output_dir, test_filename)
# as a test let's make sure that we get equal data frames
@ -114,192 +170,192 @@ class Test_Wikipedia(unittest.TestCase):
assert_frame_equal(test,baseline)
# class Test_Basic(unittest.TestCase):
class Test_Basic(unittest.TestCase):
# def setUp(self):
# if not os.path.exists("test_output"):
# os.mkdir("test_output")
def setUp(self):
if not os.path.exists("test_output"):
os.mkdir("test_output")
# self.wiki = 'sailormoon'
# self.wikiq_out_name = self.wiki + ".tsv"
# self.test_output_dir = os.path.join(".", "test_output")
# self.call_output = os.path.join(self.test_output_dir, self.wikiq_out_name)
self.wiki = 'sailormoon'
self.wikiq_out_name = self.wiki + ".tsv"
self.test_output_dir = os.path.join(".", "test_output")
self.call_output = os.path.join(self.test_output_dir, self.wikiq_out_name)
# self.infile = "{0}.xml.7z".format(self.wiki)
# self.base_call = "../wikiq {0} -o {1}"
# self.input_dir = "dumps"
# self.input_file = os.path.join(".", self.input_dir,self.infile)
# self.baseline_output_dir = "baseline_output"
self.infile = "{0}.xml.7z".format(self.wiki)
self.base_call = "../wikiq {0} -o {1}"
self.input_dir = "dumps"
self.input_file = os.path.join(".", self.input_dir,self.infile)
self.baseline_output_dir = "baseline_output"
# def test_noargs(self):
def test_noargs(self):
# test_filename = "noargs_" + self.wikiq_out_name
# test_file = os.path.join(self.test_output_dir, test_filename)
# if os.path.exists(test_file):
# os.remove(test_file)
test_filename = "noargs_" + self.wikiq_out_name
test_file = os.path.join(self.test_output_dir, test_filename)
if os.path.exists(test_file):
os.remove(test_file)
# call = self.base_call.format(self.input_file, self.test_output_dir)
# proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
# proc.wait()
call = self.base_call.format(self.input_file, self.test_output_dir)
proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
proc.wait()
# copyfile(self.call_output, test_file)
copyfile(self.call_output, test_file)
# baseline_file = os.path.join(".", self.baseline_output_dir, test_filename)
baseline_file = os.path.join(".", self.baseline_output_dir, test_filename)
# test = pd.read_table(test_file)
# baseline = pd.read_table(baseline_file)
# assert_frame_equal(test,baseline)
test = pd.read_table(test_file)
baseline = pd.read_table(baseline_file)
assert_frame_equal(test,baseline)
# def test_collapse_user(self):
# test_filename = "collapse-user_" + self.wikiq_out_name
# test_file = os.path.join(self.test_output_dir, test_filename)
# if os.path.exists(test_file):
# os.remove(test_file)
def test_collapse_user(self):
test_filename = "collapse-user_" + self.wikiq_out_name
test_file = os.path.join(self.test_output_dir, test_filename)
if os.path.exists(test_file):
os.remove(test_file)
# call = self.base_call.format(self.input_file, self.test_output_dir)
# call = call + " --collapse-user"
call = self.base_call.format(self.input_file, self.test_output_dir)
call = call + " --collapse-user"
# proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
# proc.wait()
proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
proc.wait()
# copyfile(self.call_output, test_file)
copyfile(self.call_output, test_file)
# baseline_file = os.path.join(".", self.baseline_output_dir, test_filename)
# test = pd.read_table(test_file)
# baseline = pd.read_table(baseline_file)
# assert_frame_equal(test,baseline)
baseline_file = os.path.join(".", self.baseline_output_dir, test_filename)
test = pd.read_table(test_file)
baseline = pd.read_table(baseline_file)
assert_frame_equal(test,baseline)
# def test_pwr_segment(self):
# test_filename = "persistence_segment_" + self.wikiq_out_name
# test_file = os.path.join(self.test_output_dir, test_filename)
# if os.path.exists(test_file):
# os.remove(test_file)
def test_pwr_segment(self):
test_filename = "persistence_segment_" + self.wikiq_out_name
test_file = os.path.join(self.test_output_dir, test_filename)
if os.path.exists(test_file):
os.remove(test_file)
# call = self.base_call.format(self.input_file, self.test_output_dir)
# call = call + " --persistence segment"
# print(call)
# proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
# proc.wait()
call = self.base_call.format(self.input_file, self.test_output_dir)
call = call + " --persistence segment"
print(call)
proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
proc.wait()
# copyfile(self.call_output, test_file)
copyfile(self.call_output, test_file)
# baseline_file = os.path.join(".", self.baseline_output_dir, test_filename)
baseline_file = os.path.join(".", self.baseline_output_dir, test_filename)
# test = pd.read_table(test_file)
# print(test)
# baseline = pd.read_table(baseline_file)
# assert_frame_equal(test,baseline)
test = pd.read_table(test_file)
print(test)
baseline = pd.read_table(baseline_file)
assert_frame_equal(test,baseline)
# def test_pwr_legacy(self):
# test_filename = "persistence_legacy_" + self.wikiq_out_name
# test_file = os.path.join(self.test_output_dir, test_filename)
# if os.path.exists(test_file):
# os.remove(test_file)
def test_pwr_legacy(self):
test_filename = "persistence_legacy_" + self.wikiq_out_name
test_file = os.path.join(self.test_output_dir, test_filename)
if os.path.exists(test_file):
os.remove(test_file)
# call = self.base_call.format(self.input_file, self.test_output_dir)
# call = call + " --persistence legacy"
# proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
# proc.wait()
call = self.base_call.format(self.input_file, self.test_output_dir)
call = call + " --persistence legacy"
proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
proc.wait()
# copyfile(self.call_output, test_file)
copyfile(self.call_output, test_file)
# baseline_file = os.path.join(".", self.baseline_output_dir, test_filename)
baseline_file = os.path.join(".", self.baseline_output_dir, test_filename)
# test = pd.read_table(test_file)
# baseline = pd.read_table(baseline_file)
# assert_frame_equal(test,baseline)
test = pd.read_table(test_file)
baseline = pd.read_table(baseline_file)
assert_frame_equal(test,baseline)
# def test_pwr(self):
# test_filename = "persistence_" + self.wikiq_out_name
# test_file = os.path.join(self.test_output_dir, test_filename)
# if os.path.exists(test_file):
# os.remove(test_file)
def test_pwr(self):
test_filename = "persistence_" + self.wikiq_out_name
test_file = os.path.join(self.test_output_dir, test_filename)
if os.path.exists(test_file):
os.remove(test_file)
# call = self.base_call.format(self.input_file, self.test_output_dir)
# call = call + " --persistence"
# proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
# proc.wait()
call = self.base_call.format(self.input_file, self.test_output_dir)
call = call + " --persistence"
proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
proc.wait()
# copyfile(self.call_output, test_file)
copyfile(self.call_output, test_file)
# baseline_file = os.path.join(".", self.baseline_output_dir, test_filename)
baseline_file = os.path.join(".", self.baseline_output_dir, test_filename)
# test = pd.read_table(test_file)
# baseline = pd.read_table(baseline_file)
# assert_frame_equal(test,baseline)
test = pd.read_table(test_file)
baseline = pd.read_table(baseline_file)
assert_frame_equal(test,baseline)
# def test_url_encode(self):
# test_filename = "url-encode_" + self.wikiq_out_name
def test_url_encode(self):
test_filename = "url-encode_" + self.wikiq_out_name
# test_file = os.path.join(self.test_output_dir, test_filename)
# if os.path.exists(test_file):
# os.remove(test_file)
test_file = os.path.join(self.test_output_dir, test_filename)
if os.path.exists(test_file):
os.remove(test_file)
# call = self.base_call.format(self.input_file, self.test_output_dir)
# call = call + " --url-encode"
# proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
# proc.wait()
call = self.base_call.format(self.input_file, self.test_output_dir)
call = call + " --url-encode"
proc = subprocess.Popen(call,stdout=subprocess.PIPE,shell=True)
proc.wait()
# copyfile(self.call_output, test_file)
# baseline_file = os.path.join(".", self.baseline_output_dir, test_filename)
# test = pd.read_table(test_file)
# baseline = pd.read_table(baseline_file)
# assert_frame_equal(test,baseline)
copyfile(self.call_output, test_file)
baseline_file = os.path.join(".", self.baseline_output_dir, test_filename)
test = pd.read_table(test_file)
baseline = pd.read_table(baseline_file)
assert_frame_equal(test,baseline)
# class Test_Malformed(unittest.TestCase):
# def setUp(self):
# if not os.path.exists("test_output"):
# os.mkdir("test_output")
class Test_Malformed(unittest.TestCase):
def setUp(self):
if not os.path.exists("test_output"):
os.mkdir("test_output")
# self.wiki = 'twinpeaks'
# self.wikiq_out_name = self.wiki + ".tsv"
# self.test_output_dir = os.path.join(".", "test_output")
# self.call_output = os.path.join(self.test_output_dir, self.wikiq_out_name)
self.wiki = 'twinpeaks'
self.wikiq_out_name = self.wiki + ".tsv"
self.test_output_dir = os.path.join(".", "test_output")
self.call_output = os.path.join(self.test_output_dir, self.wikiq_out_name)
# self.infile = "{0}.xml.7z".format(self.wiki)
# self.base_call = "../wikiq {0} -o {1}"
# self.input_dir = "dumps"
# self.input_file = os.path.join(".", self.input_dir,self.infile)
self.infile = "{0}.xml.7z".format(self.wiki)
self.base_call = "../wikiq {0} -o {1}"
self.input_dir = "dumps"
self.input_file = os.path.join(".", self.input_dir,self.infile)
# def test_malformed_noargs(self):
def test_malformed_noargs(self):
# call = self.base_call.format(self.input_file, self.test_output_dir)
# proc = subprocess.Popen(call,stdout=subprocess.PIPE,stderr=subprocess.PIPE, shell=True)
# proc.wait()
# outs, errs = proc.communicate()
# errlines = str(errs).split("\\n")
# self.assertEqual(errlines[-2],'xml.etree.ElementTree.ParseError: no element found: line 1369, column 0')
call = self.base_call.format(self.input_file, self.test_output_dir)
proc = subprocess.Popen(call,stdout=subprocess.PIPE,stderr=subprocess.PIPE, shell=True)
proc.wait()
outs, errs = proc.communicate()
errlines = str(errs).split("\\n")
self.assertEqual(errlines[-2],'xml.etree.ElementTree.ParseError: no element found: line 1369, column 0')
# class Test_Stdout(unittest.TestCase):
class Test_Stdout(unittest.TestCase):
# def setUp(self):
# self.wiki = 'sailormoon'
# self.wikiq_out_name = self.wiki + ".tsv"
def setUp(self):
self.wiki = 'sailormoon'
self.wikiq_out_name = self.wiki + ".tsv"
# self.infile = "{0}.xml.7z".format(self.wiki)
# self.base_call = "../wikiq {0} --stdout"
# self.input_dir = "dumps"
# self.input_file = os.path.join(".", self.input_dir,self.infile)
# self.baseline_output_dir = "baseline_output"
self.infile = "{0}.xml.7z".format(self.wiki)
self.base_call = "../wikiq {0} --stdout"
self.input_dir = "dumps"
self.input_file = os.path.join(".", self.input_dir,self.infile)
self.baseline_output_dir = "baseline_output"
# def test_noargs(self):
def test_noargs(self):
# call = self.base_call.format(self.input_file)
# proc = subprocess.run(call,stdout=subprocess.PIPE,shell=True)
# outs = proc.stdout.decode("utf8")
call = self.base_call.format(self.input_file)
proc = subprocess.run(call,stdout=subprocess.PIPE,shell=True)
outs = proc.stdout.decode("utf8")
# test_file = "noargs_" + self.wikiq_out_name
# baseline_file = os.path.join(".", self.baseline_output_dir, test_file)
# print(baseline_file)
# test = pd.read_table(StringIO(outs))
# baseline = pd.read_table(baseline_file)
# assert_frame_equal(test,baseline)
test_file = "noargs_" + self.wikiq_out_name
baseline_file = os.path.join(".", self.baseline_output_dir, test_file)
print(baseline_file)
test = pd.read_table(StringIO(outs))
baseline = pd.read_table(baseline_file)
assert_frame_equal(test,baseline)
if __name__ == '__main__':
unittest.main()

34
wikiq
View File

@ -3,7 +3,6 @@
# original wikiq headers are: title articleid revid date_time anon
# editor editor_id minor text_size text_entropy text_md5 reversion
# additions_size deletions_size
import pdb
import argparse
import sys
import os, os.path
@ -77,9 +76,25 @@ class PersistMethod:
segment = 2
legacy = 3
def calculate_persistence(tokens_added):
def calculate_persistence(tokens_added, tokens_removed, exclude_ws = True, exclude_punct = False):
cond = True
ws_lex = ['break','whitespace']
punct_lex = ['period','qmark','epoint','comma','colon','scolon','paren_open','paren_close','brack_open','brack_close','dbrack_close','dbrack_open','tab_close','tab_open','dcurly_close','dcurly_open','equals','bar','etc','bold','italic','tag','comment_end','comment_start']
if exclude_ws:
cond = lambda t: cond and not t.type in ws_lex
if exclude_punct:
cond = lambda t: cond and not t.type in punct_lex
tokens_added = [t for t in tokens_added if cond(t)]
tokens_removed = [t for t in tokens_removed if cond(t)]
return(sum([(len(x.revisions)-1) for x in tokens_added]),
len(tokens_added))
len(tokens_added),
len(tokens_removed)
)
class WikiqIterator(Dump):
@ -395,11 +410,11 @@ class WikiqParser():
if len(window) == PERSISTENCE_RADIUS:
old_rev_id, old_rev_data, old_tokens_added, old_tokens_removed = window[0]
num_token_revs, num_tokens = calculate_persistence(old_tokens_added)
num_token_revs, num_tokens_added, num_tokens_removed = calculate_persistence(old_tokens_added, old_tokens_removed)
old_rev_data["token_revs"] = num_token_revs
old_rev_data["tokens_added"] = num_tokens
old_rev_data["tokens_removed"] = len(old_tokens_removed)
old_rev_data["tokens_added"] = num_tokens_added
old_rev_data["tokens_removed"] = num_tokens_removed
old_rev_data["tokens_window"] = PERSISTENCE_RADIUS-1
self.print_rev_data(old_rev_data)
@ -417,11 +432,12 @@ class WikiqParser():
continue
rev_id, rev_data, tokens_added, tokens_removed = item
num_token_revs, num_tokens = calculate_persistence(tokens_added)
num_token_revs, num_tokens_added, num_tokens_removed = calculate_persistence(tokens_added, tokens_removed)
rev_data["token_revs"] = num_token_revs
rev_data["tokens_added"] = num_tokens
rev_data["tokens_removed"] = len(tokens_removed)
rev_data["tokens_added"] = num_tokens_added
rev_data["tokens_removed"] = num_tokens_removed
rev_data["tokens_window"] = len(window)-(i+1)
self.print_rev_data(rev_data)