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Some improvements to run affinity clustering on larger dataset and

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compute density.
This commit is contained in:
Nate E TeBlunthuis
2020-12-12 20:42:47 -08:00
parent e6294b5b90
commit 56269deee3
15 changed files with 84 additions and 84 deletions
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density/Makefile Normal file
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all: /gscratch/comdata/output/reddit_density/comment_terms_10000.feather /gscratch/comdata/output/reddit_density/comment_authors_10000.feather
/gscratch/comdata/output/reddit_density/comment_terms_10000.feather:overlap_density.py /gscratch/comdata/output/reddit_similarity/comment_terms_10000.feather /gscratch/comdata/output/reddit_similarity/comment_terms_10000.feather
python3 overlap_density.py terms --inpath="/gscratch/comdata/output/reddit_similarity/comment_terms_10000.feather" --outpath="/gscratch/comdata/output/reddit_density/comment_terms_10000.feather" --agg=pd.DataFrame.sum
/gscratch/comdata/output/reddit_density/comment_authors_10000.feather:overlap_density.py /gscratch/comdata/output/reddit_similarity/comment_authors_10000.feather
python3 overlap_density.py authors --inpath="/gscratch/comdata/output/reddit_similarity/comment_authors_10000.feather" --outpath="/gscratch/comdata/output/reddit_density/comment_authors_10000.feather" --agg=pd.DataFrame.sum