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cleaning models and updating rdd

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This commit is contained in:
Matthew Gaughan 2024-05-10 17:46:45 -05:00
parent de600e63a3
commit 735923f414
6 changed files with 4 additions and 2 deletions
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R/0510_pop_contrib_collab.rda → R/final_models/0510_pop_contrib_collab.rda
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R/0510_pop_contrib_contrib.rda → R/final_models/0510_pop_contrib_contrib.rda
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R/0510_pop_rm_collab.rda → R/final_models/0510_pop_rm_collab.rda
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R/0510_pop_rm_contrib.rda → R/final_models/0510_pop_rm_contrib.rda
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R/0510_log1p_nagq_gmodel_backup.rda → R/final_models/0510_rm_all.rda
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R/readmeRDDAnalysis.R
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@ -137,9 +137,11 @@ D_df_ranef |>
all_residuals <- residuals(all_model) all_residuals <- residuals(all_model)
qqnorm(all_residuals) qqnorm(all_residuals)
# mrg behavior for this # mrg behavior for this
mrg_model <- lmer(log1p_count ~ D * I(week_offset)+ scaled_project_age + (D * I(week_offset)| upstream_vcs_link), data=all_actions_data, REML=FALSE, control = lmerControl( mrg_actions_data$log1p_count <- log1p(mrg_actions_data$count)
optimizer ='optimx', optCtrl=list(method='L-BFGS-B'))) mrg_model <- glmer.nb(log1p_count ~ D * week_offset + scaled_project_age + (D * week_offset | upstream_vcs_link),
control=glmerControl(optimizer="bobyqa", optCtrl=list(maxfun=2e5)), data=mrg_actions_data)
summary(mrg_model) summary(mrg_model)
saveRDS(mrg, "0510_rm_mrg.rda")
#identifying the quartiles of effect for D #identifying the quartiles of effect for D
mrg_model_ranef <- ranef(mrg_model, condVar=TRUE) mrg_model_ranef <- ranef(mrg_model, condVar=TRUE)
df_mrg_ranefs <- as.data.frame(mrg_model_ranef) df_mrg_ranefs <- as.data.frame(mrg_model_ranef)