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update examples with working streaming

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This commit is contained in:
Nate E TeBlunthuis 2020-07-07 11:47:17 -07:00
parent 40d4563770
commit e22ddf23da
2 changed files with 23 additions and 17 deletions
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4
examples/pyarrow_reading.py
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@ -1,8 +1,8 @@
import pyarrow.dataset as ds import pyarrow.dataset as ds
import pyarrow as pa
# A pyarrow dataset abstracts reading, writing, or filtering a parquet file. It does not read dataa into memory. # A pyarrow dataset abstracts reading, writing, or filtering a parquet file. It does not read dataa into memory.
#dataset = ds.dataset(pathlib.Path('/gscratch/comdata/output/reddit_submissions_by_subreddit.parquet/'), format='parquet', partitioning='hive') #dataset = ds.dataset(pathlib.Path('/gscratch/comdata/output/reddit_submissions_by_subreddit.parquet/'), format='parquet', partitioning='hive')
dataset = ds.dataset('/gscratch/comdata/output/reddit_submissions_by_subreddit.parquet/', format='parquet', partitioning='hive') dataset = ds.dataset('/gscratch/comdata/output/reddit_comments_by_subreddit.parquet/', format='parquet')
# let's get all the comments to two subreddits: # let's get all the comments to two subreddits:
subreddits_to_pull = ['seattle','seattlewa'] subreddits_to_pull = ['seattle','seattlewa']

34
examples/pyarrow_streaming.py
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@ -1,9 +1,9 @@
import pyarrow.dataset as ds pimport pyarrow.dataset as ds
from itertools import chain, groupby, islice from itertools import chain, groupby, islice
# A pyarrow dataset abstracts reading, writing, or filtering a parquet file. It does not read dataa into memory. # A pyarrow dataset abstracts reading, writing, or filtering a parquet file. It does not read dataa into memory.
#dataset = ds.dataset(pathlib.Path('/gscratch/comdata/output/reddit_submissions_by_subreddit.parquet/'), format='parquet', partitioning='hive') #dataset = ds.dataset(pathlib.Path('/gscratch/comdata/output/reddit_submissions_by_subreddit.parquet/'), format='parquet', partitioning='hive')
dataset = ds.dataset('/gscratch/comdata/output/reddit_submissions_by_author.parquet', format='parquet', partitioning='hive') dataset = ds.dataset('/gscratch/comdata/output/reddit_submissions_by_author.parquet', format='parquet')
# let's get all the comments to two subreddits: # let's get all the comments to two subreddits:
subreddits_to_pull = ['seattlewa','seattle'] subreddits_to_pull = ['seattlewa','seattle']
@ -11,22 +11,28 @@ subreddits_to_pull = ['seattlewa','seattle']
# instead of loading the data into a pandas dataframe all at once we can stream it. This lets us start working with it while it is read. # instead of loading the data into a pandas dataframe all at once we can stream it. This lets us start working with it while it is read.
scan_tasks = dataset.scan(filter = ds.field('subreddit').isin(subreddits_to_pull), columns=['id','subreddit','CreatedAt','author','ups','downs','score','subreddit_id','stickied','title','url','is_self','selftext']) scan_tasks = dataset.scan(filter = ds.field('subreddit').isin(subreddits_to_pull), columns=['id','subreddit','CreatedAt','author','ups','downs','score','subreddit_id','stickied','title','url','is_self','selftext'])
# simple function to execute scantasks and create a stream of pydict rows # simple function to execute scantasks and create a stream of rows
def execute_scan_task(st): def iterate_rows(scan_tasks):
# an executed scan task yields an iterator of record_batches for st in scan_tasks:
def unroll_record_batch(rb):
df = rb.to_pandas()
return df.itertuples()
for rb in st.execute(): for rb in st.execute():
yield unroll_record_batch(rb) df = rb.to_pandas()
for t in df.itertuples():
yield t
row_iter = iterate_rows(scan_tasks)
# now we just need to flatten and we have our iterator
row_iter = chain.from_iterable(chain.from_iterable(map(lambda st: execute_scan_task(st), scan_tasks)))
# now we can use python's groupby function to read one author at a time # now we can use python's groupby function to read one author at a time
# note that the same author can appear more than once since the record batches may not be in the correct order. # note that the same author can appear more than once since the record batches may not be in the correct order.
author_submissions = groupby(row_iter, lambda row: row.author) author_submissions = groupby(row_iter, lambda row: row.author)
count_dict = {}
for auth, posts in author_submissions: for auth, posts in author_submissions:
print(f"{auth} has {len(list(posts))} posts") if auth in count_dict:
count_dict[auth] = count_dict[auth] + 1
else:
count_dict[auth] = 1
# since it's partitioned and sorted by author, we get one group for each author
any([ v != 1 for k,v in count_dict.items()])