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updating analysis for co study

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This commit is contained in:
Matthew Gaughan 2025-02-07 10:10:31 -08:00
parent 0e40718a7e
commit c643329597
16 changed files with 5016 additions and 4981 deletions
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BIN
020425_contributing_crescendo_model.rda
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19
cleaning_scripts/verifying_count_on_manifest.R Normal file
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@ -0,0 +1,19 @@
library(dplyr)
count_path <- "/mmfs1/gscratch/comdata/users/mjilg/govdoc-cr-data/final_data/metadata/co_0205_CONTRIBUTING_weekly_count_data.csv"
manifest_path <- "validation/020525_CONTRIBUTING_manifest.csv"
count_df <- read.csv(count_path)
manifest_df <- read.csv(manifest_path)
length(unique(count_df$project_id))
unique_project_ids <- unique(count_df$project_id)
missing_project_ids <- setdiff(unique_project_ids, manifest_df$repo_id)
missing_project_ids
count_df_filtered <- count_df %>% filter(!project_id %in% missing_project_ids)
length(unique(count_df_filtered$project_id))
missing_repo_ids <- setdiff(manifest_df$repo_id, count_df_filtered$project_id)
write.csv(count_df_filtered, "/mmfs1/gscratch/comdata/users/mjilg/govdoc-cr-data/final_data/metadata/final_0207_CONTRIBUTING_weekly_count_data.csv", row.names =FALSE)

24
mlm/contributing_did_prep.R
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@ -1,18 +1,19 @@
library(dplyr)
library(lubridate)
library(rdd)
library(tidyr)
contributing_df_filepath <- "/mmfs1/gscratch/comdata/users/mjilg/govdoc-cr-data/final_data/CONTRIBUTING_weekly_count_data.csv"
contributing_df_filepath <- "/mmfs1/gscratch/comdata/users/mjilg/govdoc-cr-data/final_data/metadata/final_0207_CONTRIBUTING_weekly_count_data.csv"
df = read.csv(contributing_df_filepath, header = TRUE)
#EDA
var(df$commit_count) # 325.5261
mean(df$commit_count) # 7.743385
var(df$commit_count) # 349.06
mean(df$commit_count) # 8.371495
median(df$commit_count) # 1
mean(df$age) # 4838.649 days
mean(df$age_at_commit) # 2141.996 days
median(df$age) # 4597 days
median(df$age_at_commit) # 1603 days
mean(df$age) # 4939.859
mean(df$age_at_commit) # 2286.772 days
median(df$age) #4738 says
median(df$age_at_commit) # 1806 days
# scale and log-transform
df$scaled_age <- scale(df$age)
@ -21,10 +22,17 @@ df$log1p_count <- log1p(df$commit_count)
#getting IK Bandwidth
get_optimal_bandwidth <- function(df){
IKbandwidth(df$week_index, df$log1p_count, cutpoint = 0, verbose = FALSE, kernel = "triangular")
bw <- tryCatch({
IKbandwidth(df$relative_week, df$log1p_count, cutpoint = 0, verbose = FALSE, kernel = "triangular")
}, error = function(e) {
NA
})
}
mean_optimal_bandwidth <- df %>%
group_by(project_id) %>%
summarise(optimal_bandwidth = get_optimal_bandwidth(cur_data())) %>%
drop_na(optimal_bandwidth) |>
summarise(mean_optimal_bandwidth = mean(optimal_bandwidth))
#5.676423

716
mlm/data/0201_contributing_dweek_ranefs.csv
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@ -1,716 +0,0 @@
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"656","ran_vals","project_id","tqdm_tqdm.git","before_after:week_index",0.053296792380904,0.0864337468535963,-0.116110238500997,0.222703823262805,1,378
"657","ran_vals","project_id","trevorld_r-optparse.git","before_after:week_index",-0.499145276412738,0.181690814996526,-0.855252730127659,-0.143037822697817,0,22
"658","ran_vals","project_id","trezor_trezor-firmware.git","before_after:week_index",0.381154217142729,0.0490109142346569,0.28509459039342,0.477213843892038,2,681
"659","ran_vals","project_id","troglobit_inadyn","before_after:week_index",0.0826483926266794,0.0823345562308339,-0.078724372268843,0.244021157522202,1,411
"660","ran_vals","project_id","Tux_Text-CSV_XS.git","before_after:week_index",-0.189977387287352,0.124663554541083,-0.43431346437262,0.0543586897979155,1,192
"661","ran_vals","project_id","twbs_bootstrap-sass","before_after:week_index",0.0119300086628006,0.0928648173039842,-0.1700816886839,0.193941706009502,1,342
"662","ran_vals","project_id","twilio_twilio-python","before_after:week_index",0.0916777058518811,0.0813813904877355,-0.0678268885158709,0.251182300219633,1,420
"663","ran_vals","project_id","twisted_pydoctor","before_after:week_index",0.376553426498389,0.0498868681811727,0.278776961561793,0.474329891434985,2,676
"664","ran_vals","project_id","ua-parser_uap-core.git","before_after:week_index",0.090301897074397,0.0817511208955456,-0.0699273555766523,0.250531149725446,1,417
"665","ran_vals","project_id","ukui_peony","before_after:week_index",0.333048338047732,0.0530792523691061,0.229014915077972,0.437081761017493,2,645
"666","ran_vals","project_id","Ultimaker_Cura","before_after:week_index",0.362148082836441,0.0505244365325766,0.263122006893411,0.461174158779471,2,666
"667","ran_vals","project_id","un33k_django-ipware","before_after:week_index",-0.529361166651499,0.187075747563832,-0.896022894257517,-0.16269943904548,0,5
"668","ran_vals","project_id","unknown-horizons_unknown-horizons.git","before_after:week_index",0.419992104766536,0.0458547831817979,0.330118381211319,0.509865828321753,2,705
"669","ran_vals","project_id","untitaker_python-atomicwrites","before_after:week_index",-0.152834899728803,0.117019575119352,-0.382189052448913,0.0765192529913063,1,214
"670","ran_vals","project_id","varietywalls_variety.git","before_after:week_index",0.0774144449856542,0.0825633974438188,-0.0844068404454971,0.239235730416805,1,401
"671","ran_vals","project_id","varvet_pundit","before_after:week_index",-0.0909420940275992,0.108596506434927,-0.303787335486929,0.121903147431731,1,256
"672","ran_vals","project_id","vcr_vcr","before_after:week_index",0.300346100044626,0.0566323935201245,0.189348648386883,0.41134355170237,2,606
"673","ran_vals","project_id","vim-airline_vim-airline.git","before_after:week_index",0.250794279220423,0.062208056175112,0.128868729568959,0.372719828871887,2,557
"674","ran_vals","project_id","vim-syntastic_syntastic","before_after:week_index",0.314366414566401,0.0552940138801542,0.205992138800641,0.422740690332161,2,620
"675","ran_vals","project_id","virt-manager_virt-manager","before_after:week_index",0.304379939778706,0.0568849542579229,0.192887478170968,0.415872401386443,2,614
"676","ran_vals","project_id","voxpupuli_beaker","before_after:week_index",0.348990913830841,0.0519492924185047,0.247172171668232,0.45080965599345,2,660
"677","ran_vals","project_id","voxpupuli_librarian-puppet.git","before_after:week_index",-0.39422551323252,0.162053783935859,-0.71184509330524,-0.076605933159801,0,77
"678","ran_vals","project_id","voxpupuli_pypuppetdb","before_after:week_index",-0.296897304660233,0.144628391440308,-0.580363743025198,-0.0134308662952685,0,126
"679","ran_vals","project_id","watson-developer-cloud_python-sdk.git","before_after:week_index",-0.00466489730332885,0.0951357687263136,-0.191127577648435,0.181797783041778,1,319
"680","ran_vals","project_id","webcamoid_webcamoid.git","before_after:week_index",-0.037041763400456,0.0999757201043483,-0.232990574133436,0.158907047332524,1,296
"681","ran_vals","project_id","webrtchacks_adapter","before_after:week_index",0.291563349220042,0.0572926942629675,0.179271731887362,0.403854966552723,2,595
"682","ran_vals","project_id","websocket-client_websocket-client","before_after:week_index",0.197776682968342,0.067642776549638,0.0651992771167612,0.330354088819923,2,509
"683","ran_vals","project_id","WoLpH_numpy-stl","before_after:week_index",-0.0877980950901149,0.10536403537173,-0.294307809684511,0.118711619504281,1,260
"684","ran_vals","project_id","wtforms_flask-wtf.git","before_after:week_index",-0.0896057377295899,0.108416284955035,-0.30209775157909,0.12288627611991,1,258
"685","ran_vals","project_id","X0rg_CPU-X.git","before_after:week_index",0.100819116462142,0.0795716427928496,-0.0551384376025291,0.256776670526814,1,428
"686","ran_vals","project_id","Xastir_Xastir.git","before_after:week_index",0.0604885496605608,0.0832039581603247,-0.102588211704853,0.223565311025975,1,383
"687","ran_vals","project_id","Xaviju_inkscape-open-symbols","before_after:week_index",-0.0840533586580127,0.107471745431413,-0.294694109059238,0.126587391743213,1,263
"688","ran_vals","project_id","xonsh_xonsh.git","before_after:week_index",0.343590234792073,0.0522108731709255,0.241258803775671,0.445921665808476,2,653
"689","ran_vals","project_id","xtaran_unburden-home-dir","before_after:week_index",-0.0771036692781287,0.105537532368671,-0.283953431737954,0.129746093181696,1,268
"690","ran_vals","project_id","ycm-core_ycmd","before_after:week_index",-0.000605397284301289,0.0946615699163441,-0.186138665040356,0.184927870471753,1,328
"691","ran_vals","project_id","ycm-core_YouCompleteMe","before_after:week_index",0.324527083149419,0.0541634904978633,0.218368592496629,0.430685573802208,2,635
"692","ran_vals","project_id","yrro_command-t","before_after:week_index",-0.20755983067889,0.128814487712847,-0.460031587283048,0.0449119259252668,1,181
"693","ran_vals","project_id","ytdl-org_youtube-dl.git","before_after:week_index",0.449591992027548,0.0433834492172356,0.364561994036644,0.534621990018452,2,715
"694","ran_vals","project_id","zaach_jison","before_after:week_index",-0.332005744433942,0.15136793570203,-0.628681446824096,-0.0353300420437893,0,109
"695","ran_vals","project_id","zeroc-ice_ice-builder-gradle-debian-packaging.git","before_after:week_index",-0.335455388418513,0.151354855240113,-0.632105453574409,-0.0388053232626177,0,107
"696","ran_vals","project_id","zeroc-ice_ice-debian-packaging.git","before_after:week_index",-0.027148431809379,0.0984513949449932,-0.220109620129294,0.165812756510536,1,303
"697","ran_vals","project_id","zeromq_czmq.git","before_after:week_index",0.381249216427842,0.0490685492305357,0.285076627162362,0.477421805693323,2,682
"698","ran_vals","project_id","zeromq_pyzmq.git","before_after:week_index",0.219297261009572,0.0650827149762302,0.0917374836400749,0.346857038379069,2,531
"699","ran_vals","project_id","zkat_ssri.git","before_after:week_index",-0.137219468453288,0.116022491632154,-0.364619373448909,0.0901804365423333,1,227
"700","ran_vals","project_id","zloirock_core-js.git","before_after:week_index",0.0286208178547907,0.089960456742353,-0.147698437392995,0.204940073102576,1,355
"701","ran_vals","project_id","zmartzone_cjose.git","before_after:week_index",-0.337146755776738,0.150737404496958,-0.632586639713821,-0.0417068718396543,0,105
"702","ran_vals","project_id","zopefoundation_BTrees.git","before_after:week_index",-0.506067068334373,0.182996828739419,-0.864734261948677,-0.147399874720068,0,15
"703","ran_vals","project_id","zopefoundation_roman","before_after:week_index",-0.497237220569924,0.181809762271757,-0.853577806660357,-0.140896634479492,0,24
"704","ran_vals","project_id","zopefoundation_zc.lockfile","before_after:week_index",-0.432749289706663,0.17034543413337,-0.766620205538908,-0.0988783738744178,0,60
"705","ran_vals","project_id","zopefoundation_zope.component","before_after:week_index",-0.502740499493984,0.183210022507988,-0.861825545216412,-0.143655453771556,0,19.5
"706","ran_vals","project_id","zopefoundation_zope.deprecation.git","before_after:week_index",-0.502740499493984,0.183210022507988,-0.861825545216412,-0.143655453771556,0,19.5
"707","ran_vals","project_id","zopefoundation_zope.event","before_after:week_index",-0.396242576932826,0.16309670627248,-0.715906247223996,-0.0765789066416564,0,76
"708","ran_vals","project_id","zopefoundation_zope.i18nmessageid","before_after:week_index",-0.342604671720735,0.153904664448915,-0.64425227109333,-0.0409570723481391,0,98
"709","ran_vals","project_id","zopefoundation_zope.interface.git","before_after:week_index",-0.444330467916948,0.172628764726695,-0.78267662947691,-0.105984306356987,0,52
"710","ran_vals","project_id","zopefoundation_zope.proxy","before_after:week_index",-0.52583950599937,0.187319682347384,-0.892979336995726,-0.158699675003013,0,9.5
"711","ran_vals","project_id","zopefoundation_zope.schema","before_after:week_index",-0.52583950599937,0.187319682347384,-0.892979336995726,-0.158699675003013,0,9.5
"712","ran_vals","project_id","zopefoundation_zope.testing","before_after:week_index",-0.439747589323972,0.171892432910718,-0.776650567043946,-0.102844611603998,0,54
"713","ran_vals","project_id","zopefoundation_zope.testrunner","before_after:week_index",-0.527875337776401,0.187178404445512,-0.894738269173277,-0.161012406379525,0,8
"714","ran_vals","project_id","zsh-users_antigen","before_after:week_index",0.107791818445195,0.0794472420990712,-0.0479219147400187,0.263505551630409,1,438
"715","ran_vals","project_id","zyga_padme","before_after:week_index",-0.0799196805037215,0.10680930645632,-0.289262074371811,0.129422713364368,1,265
1 effect group level term estimate std.error conf.low conf.high ranef_grouping rank
2 1 ran_vals project_id 01org_isa-l.git before_after:week_index -0.0954554044167926 0.109224825519046 -0.309532128651795 0.11862131981821 1 253
3 2 ran_vals project_id abishekvashok_cmatrix.git before_after:week_index -0.378357737644148 0.158896560317473 -0.689789273133692 -0.066926202154605 0 85
4 3 ran_vals project_id Ableton_link.git before_after:week_index -0.223672206163464 0.131016231409784 -0.480459301116807 0.0331148887898784 1 171
5 4 ran_vals project_id AFLplusplus_AFLplusplus.git before_after:week_index 0.344779661308246 0.0519120204381645 0.243033970884736 0.446525351731755 2 654
6 5 ran_vals project_id ahmetb_kubectx before_after:week_index -0.252324588331934 0.136119620341301 -0.51911414179015 0.0144649651262825 1 154
7 6 ran_vals project_id aio-libs_aiohttp.git before_after:week_index 0.348421048988075 0.0518256061436343 0.246844727469594 0.449997370506556 2 658
8 7 ran_vals project_id aio-libs_aiomysql.git before_after:week_index -0.142475601320515 0.116488431659931 -0.370788731989534 0.0858375293485052 1 222
9 8 ran_vals project_id akheron_jansson.git before_after:week_index -0.39259701077219 0.162124736005091 -0.710355654345232 -0.0748383671991473 0 80
10 9 ran_vals project_id alanxz_rabbitmq-c.git before_after:week_index 0.0285801853317628 0.0883974004109623 -0.144675535800689 0.201835906464215 1 354
11 10 ran_vals project_id alastair_python-musicbrainz-ngs before_after:week_index -0.266600883618662 0.139404019305656 -0.539827740757875 0.00662597352055128 1 148
12 11 ran_vals project_id amperser_proselint before_after:week_index -0.0175114460013178 0.0970422119111104 -0.207710686327198 0.172687794324562 1 308
13 12 ran_vals project_id amueller_word_cloud before_after:week_index -0.17398180916363 0.122771839835153 -0.414610193556251 0.06664657522899 1 201
14 13 ran_vals project_id analogdevicesinc_libiio.git before_after:week_index 0.253673697862487 0.0612071449976703 0.133709898070532 0.373637497654442 2 563
15 14 ran_vals project_id andialbrecht_sqlparse.git before_after:week_index -0.210882537162697 0.128510129332999 -0.462757762303958 0.0409926879785653 1 180
16 15 ran_vals project_id angband_angband before_after:week_index 0.292168789235762 0.0577947479447345 0.178893164768512 0.405444413703012 2 597
17 16 ran_vals project_id apache_trafficserver before_after:week_index 0.403296299005798 0.0471845745052514 0.310816232349658 0.495776365661937 2 697
18 17 ran_vals project_id aptly-dev_aptly.git before_after:week_index 0.227855341930666 0.0640765730767852 0.102267566447418 0.353443117413914 2 541
19 18 ran_vals project_id ARMmbed_yotta.git before_after:week_index 0.322900028690542 0.0544009327856456 0.216276159705292 0.429523897675791 2 634
20 19 ran_vals project_id assimp_assimp before_after:week_index 0.372933041553955 0.04988332880624 0.275163513664756 0.470702569443155 2 675
21 20 ran_vals project_id astropy_astropy-helpers before_after:week_index 0.165573064481565 0.0710193295683453 0.0263777363214273 0.304768392641702 2 483
22 21 ran_vals project_id astropy_astroquery.git before_after:week_index 0.288250494539489 0.0583054298411379 0.173973951947732 0.402527037131246 2 589
23 22 ran_vals project_id astropy_photutils.git before_after:week_index 0.00813807966640954 0.0922350063123202 -0.172639210819562 0.188915370152382 1 334
24 23 ran_vals project_id audacity_audacity.git before_after:week_index 0.41021821654575 0.0465435966897316 0.318994443322919 0.501441989768582 2 700
25 24 ran_vals project_id aws_aws-cli before_after:week_index 0.388291972634572 0.0482872521065197 0.293650697593388 0.482933247675757 2 687
26 25 ran_vals project_id aws_aws-xray-sdk-python before_after:week_index 0.101784568310363 0.0787404212277687 -0.0525438214235767 0.256112958044303 1 429
27 26 ran_vals project_id awslabs_amazon-ecr-credential-helper before_after:week_index -0.415735503471387 0.166139922148114 -0.741363767275979 -0.0901072396667964 0 68
28 27 ran_vals project_id axel-download-accelerator_axel.git before_after:week_index -0.0850546223578752 0.107255527868671 -0.295271594123303 0.125162349407553 1 262
29 28 ran_vals project_id Backblaze_B2_Command_Line_Tool before_after:week_index 0.0797322141628766 0.0813977351426763 -0.0798044151398992 0.239268843465652 1 404
30 29 ran_vals project_id Backblaze_b2-sdk-python.git before_after:week_index 0.178265814766173 0.0695394361306075 0.0419710244449593 0.314560605087387 2 496
31 30 ran_vals project_id bastibe_python-soundfile.git before_after:week_index -0.142382072633849 0.11461442534909 -0.36702221842682 0.082258073159122 1 223
32 31 ran_vals project_id bbatsov_powerpack.git before_after:week_index -0.529467857304426 0.187068390904348 -0.896115166122808 -0.162820548486044 0 3
33 32 ran_vals project_id beautify-web_js-beautify before_after:week_index 0.251200100897068 0.0617910222151063 0.130091922787545 0.37230827900659 2 560
34 33 ran_vals project_id Beep6581_RawTherapee before_after:week_index 0.367637847750999 0.0502868047732415 0.269077521497849 0.46619817400415 2 669
35 34 ran_vals project_id biojava_biojava.git before_after:week_index 0.222449193190932 0.0648998034905838 0.0952479157456608 0.349650470636203 2 534
36 35 ran_vals project_id bit-team_backintime before_after:week_index -0.296961102649306 0.144459638553153 -0.58009679143316 -0.0138254138654516 0 125
37 36 ran_vals project_id bitletorg_weupnp.git before_after:week_index -0.379701932652238 0.160418172358214 -0.694115772940077 -0.0652880923643994 0 84
38 37 ran_vals project_id bk138_gromit-mpx.git before_after:week_index -0.0153630139492314 0.0959804991631537 -0.203481335527189 0.172755307628727 1 309
39 38 ran_vals project_id Blosc_c-blosc before_after:week_index -0.104578671917407 0.109926356799348 -0.320030372195828 0.110873028361014 1 246
40 39 ran_vals project_id bobek_pkg-pimd before_after:week_index 0.0715670663829984 0.0828478352662006 -0.0908117069358622 0.233945839701859 1 397
41 40 ran_vals project_id boto_boto3 before_after:week_index 0.276328579154936 0.058872919883992 0.1609397765176 0.391717381792273 2 581
42 41 ran_vals project_id boto_botocore before_after:week_index 0.306676976728393 0.0558484344014266 0.19721605670865 0.416137896748137 2 615
43 42 ran_vals project_id boto_s3transfer before_after:week_index 0.0404966681252584 0.0876435244545407 -0.131281483283797 0.212274819534314 1 365
44 43 ran_vals project_id box_flaky.git before_after:week_index -0.187936137521747 0.12503861925042 -0.433007327929186 0.0571350528856927 1 194
45 44 ran_vals project_id box_genty.git before_after:week_index -0.361033836795586 0.156330521740751 -0.667436029091813 -0.054631644499358 0 91
46 45 ran_vals project_id boxbackup_boxbackup.git before_after:week_index -0.412619962823563 0.166863393176575 -0.739666203787797 -0.0855737218593289 0 69
47 46 ran_vals project_id breunigs_python-librtmp-debian before_after:week_index -0.232245485643344 0.132780260488797 -0.492490014059233 0.0279990427725454 1 163
48 47 ran_vals project_id brunonova_drmips before_after:week_index -0.113654580437882 0.111895595848891 -0.332965918330359 0.105656757454594 1 240
49 48 ran_vals project_id c-ares_c-ares.git before_after:week_index -0.382154982197474 0.161188052687146 -0.698077760202426 -0.0662322041925226 0 82
50 49 ran_vals project_id c4urself_bump2version before_after:week_index -0.33773554672198 0.151496792856902 -0.634663804494833 -0.0408072889491268 0 104
51 50 ran_vals project_id calamares_calamares.git before_after:week_index 0.382744996817375 0.0487773278545149 0.287143190960424 0.478346802674327 2 683
52 51 ran_vals project_id canonical_lightdm.git before_after:week_index -0.504827591973122 0.183076060092487 -0.863650076185886 -0.146005107760358 0 18
53 52 ran_vals project_id capistrano_capistrano.git before_after:week_index 0.302426756055821 0.0562530127882514 0.192172876968978 0.412680635142665 2 610
54 53 ran_vals project_id capistrano_sshkit.git before_after:week_index 0.0208968450718041 0.0911861367389383 -0.15782469882586 0.199618388969468 1 348
55 54 ran_vals project_id carljm_django-model-utils.git before_after:week_index 0.0160878330434113 0.0926554584523026 -0.165513528494149 0.197689194580972 1 346
56 55 ran_vals project_id castle-engine_castle-engine.git before_after:week_index 0.414084511704366 0.0464106203450174 0.32312136732797 0.505047656080762 2 704
57 56 ran_vals project_id ceres-solver_ceres-solver.git before_after:week_index -0.0028044553902808 0.0935245469631276 -0.186109199108436 0.180500288327874 1 321
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701 700 ran_vals project_id zloirock_core-js.git before_after:week_index 0.0286208178547907 0.089960456742353 -0.147698437392995 0.204940073102576 1 355
702 701 ran_vals project_id zmartzone_cjose.git before_after:week_index -0.337146755776738 0.150737404496958 -0.632586639713821 -0.0417068718396543 0 105
703 702 ran_vals project_id zopefoundation_BTrees.git before_after:week_index -0.506067068334373 0.182996828739419 -0.864734261948677 -0.147399874720068 0 15
704 703 ran_vals project_id zopefoundation_roman before_after:week_index -0.497237220569924 0.181809762271757 -0.853577806660357 -0.140896634479492 0 24
705 704 ran_vals project_id zopefoundation_zc.lockfile before_after:week_index -0.432749289706663 0.17034543413337 -0.766620205538908 -0.0988783738744178 0 60
706 705 ran_vals project_id zopefoundation_zope.component before_after:week_index -0.502740499493984 0.183210022507988 -0.861825545216412 -0.143655453771556 0 19.5
707 706 ran_vals project_id zopefoundation_zope.deprecation.git before_after:week_index -0.502740499493984 0.183210022507988 -0.861825545216412 -0.143655453771556 0 19.5
708 707 ran_vals project_id zopefoundation_zope.event before_after:week_index -0.396242576932826 0.16309670627248 -0.715906247223996 -0.0765789066416564 0 76
709 708 ran_vals project_id zopefoundation_zope.i18nmessageid before_after:week_index -0.342604671720735 0.153904664448915 -0.64425227109333 -0.0409570723481391 0 98
710 709 ran_vals project_id zopefoundation_zope.interface.git before_after:week_index -0.444330467916948 0.172628764726695 -0.78267662947691 -0.105984306356987 0 52
711 710 ran_vals project_id zopefoundation_zope.proxy before_after:week_index -0.52583950599937 0.187319682347384 -0.892979336995726 -0.158699675003013 0 9.5
712 711 ran_vals project_id zopefoundation_zope.schema before_after:week_index -0.52583950599937 0.187319682347384 -0.892979336995726 -0.158699675003013 0 9.5
713 712 ran_vals project_id zopefoundation_zope.testing before_after:week_index -0.439747589323972 0.171892432910718 -0.776650567043946 -0.102844611603998 0 54
714 713 ran_vals project_id zopefoundation_zope.testrunner before_after:week_index -0.527875337776401 0.187178404445512 -0.894738269173277 -0.161012406379525 0 8
715 714 ran_vals project_id zsh-users_antigen before_after:week_index 0.107791818445195 0.0794472420990712 -0.0479219147400187 0.263505551630409 1 438
716 715 ran_vals project_id zyga_padme before_after:week_index -0.0799196805037215 0.10680930645632 -0.289262074371811 0.129422713364368 1 265

4248
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mlm/readme_did_prep.R
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@ -3,7 +3,7 @@ library(dplyr)
library(lubridate)
library(rdd)
readme_df_filepath <- "/mmfs1/gscratch/comdata/users/mjilg/govdoc-cr-data/final_data/README_weekly_count_data.csv"
readme_df_filepath <- "/mmfs1/gscratch/comdata/users/mjilg/govdoc-cr-data/final_data/metadata/final_0207_README_weekly_count_data.csv"
df = read.csv(readme_df_filepath, header = TRUE)
#filtered_df <- df |>
@ -13,12 +13,12 @@ df = read.csv(readme_df_filepath, header = TRUE)
#write.csv(filtered_df, output_filepath, row.names = FALSE)
#EDA
var(df$commit_count) # 112.4945
mean(df$commit_count) # 2.431342
var(df$commit_count) # 207.7579
mean(df$commit_count) # 4.31725
median(df$commit_count) # 0
mean(df$age) # 4911.734 days
mean(df$age_at_commit) # 197.296 days
median(df$age) # 4689 days
mean(df$age) # 5074.828
mean(df$age_at_commit) # 533.7488
median(df$age) # 4876
median(df$age_at_commit) # 0 days
# scale and log-transform
@ -29,12 +29,17 @@ df$log1p_count <- log1p(df$commit_count)
#getting IK Bandwidth
get_optimal_bandwidth <- function(df){
IKbandwidth(df$week_index, df$log1p_count, cutpoint = 0, verbose = FALSE, kernel = "triangular")
bw <- tryCatch({
IKbandwidth(df$relative_week, df$log1p_count, cutpoint = 0, verbose = FALSE, kernel = "triangular")
}, error = function(e) {
NA
})
}
mean_optimal_bandwidth <- df %>%
group_by(project_id) %>%
summarise(optimal_bandwidth = get_optimal_bandwidth(cur_data())) %>%
drop_na(optimal_bandwidth) |>
summarise(mean_optimal_bandwidth = mean(optimal_bandwidth))
#Mean Optimal Bandwidth: 5.44841
#Mean Optimal Bandwidth: 5.471781

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validation/020525_CONTRIBUTING_manifest.csv Normal file
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@ -0,0 +1,715 @@
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12b4c8437580257d967f2d7b20809f62f9b0e6c2,https://github.com/chrys87/simple-orca-plugin-system.git,chrys87_simple-orca-plugin-system.git,chrys87/simple-orca-plugin-system.git,56f1d2db1b7b0fdff0312ff8199bb885f3f93a3d,2656
8e1efea2ea829e646bd33841e720244dc5dc4918,https://github.com/kjn/lbzip2,kjn_lbzip2,kjn/lbzip2,7c905684817019dada92fb5e4e09b23a2937927a,2785
b8fa28b5dd27eafd44f2734ea9cb495a3cdf2e07,https://github.com/nicotine-plus/nicotine-plus,nicotine-plus_nicotine-plus,nicotine-plus/nicotine-plus,e9fc10c461deb62603cab6368ba5e82457ad876e,2889
b24af9c96d353160b466f0f6217048ea17a0d014,https://github.com/lilydjwg/pssh.git,lilydjwg_pssh.git,lilydjwg/pssh.git,340c70b85212106ce952de986f5f725dcb80a93e,3437
235381267b1c6821fe6ff80d66abb33378714dd2,https://github.com/socnetv/app,socnetv_app,socnetv/app,e0dac012e16c724f93a2cb9d8a54372a7a4f88b8,3480
5a309dc17ca4aff0c660dce37ab43581bf3b2a0b,https://github.com/jnwatson/py-lmdb,jnwatson_py-lmdb,jnwatson/py-lmdb,c7591acf9498d7bf1d4dbd7b22d96afd6370696b,3530
f594182282f3cd65a3b29e4fc366ee090bfee171,https://github.com/angband/angband,angband_angband,angband/angband,e87b68e4de72aff66675e6ba8ed1963f8610ef16,3673
8071b12616dd5c063e38d9addcfced58df058192,https://github.com/ClusterLabs/crmsh,ClusterLabs_crmsh,ClusterLabs/crmsh,20c6e4996ff89ddc9fbd3c52c97ef85ece250e60,3866
ba6774ae1dd5199a733dfaeaf438dff095284de7,https://github.com/dosfstools/dosfstools.git,dosfstools_dosfstools.git,dosfstools/dosfstools.git,124598b2bdfc9901ce4a612f4ef4e4c916a2faa3,4025
47d70ef264083de2ca8e786b5f52ca7d175d0bb5,https://github.com/skk-dev/skktools,skk-dev_skktools,skk-dev/skktools,47d70ef264083de2ca8e786b5f52ca7d175d0bb5,4076
b24af9c96d353160b466f0f6217048ea17a0d014,https://github.com/krig/parallax,krig_parallax,krig/parallax,340c70b85212106ce952de986f5f725dcb80a93e,4123
1 commit_hash upstream_vcs_link repo_id project_handle lagged_hash project_index
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3 5b755058f5aa951b295acc6c31c1d01e62f82d8c https://github.com/ioquake/ioq3 ioquake_ioq3 ioquake/ioq3 00cd405e5adb7542238ce9bf1370364531865728 404
4 2ed61cfb3ad3d404b9a44bbb3f4c8083b469ae22 https://github.com/tikzit/tikzit.git tikzit_tikzit.git tikzit/tikzit.git e1cf0babff63e670e0d550b4072c22649a117fa7 702
5 9b8b77134a69699bd942e8a7d3219938723c4b47 https://github.com/lumean/svg-graph2 lumean_svg-graph2 lumean/svg-graph2 a0119478dae06b4af34f7d0e061201317567b21f 1048
6 20c9770cc68d165a0cb7b8a332103b9659b29e4c https://gitlab.xiph.org/xiph/vorbis.git xiph_vorbis.git xiph/vorbis.git 20c9770cc68d165a0cb7b8a332103b9659b29e4c 1110
7 6db1a31e58ee15c448448139e7d3a9e72b14268f https://github.com/spesmilo/electrum.git spesmilo_electrum.git spesmilo/electrum.git eedf13bfdb079371c3e905f7507fa82e42467af2 1460
8 2318592103386450b69c3d294812209e95850b24 https://github.com/PDAL/PDAL.git PDAL_PDAL.git PDAL/PDAL.git a52d26f411adbc781bbbc8144e50887fc7ceaaba 1729
9 faf8800184faeb6ed2895221a46ffc4283873794 https://github.com/Beep6581/RawTherapee Beep6581_RawTherapee Beep6581/RawTherapee 35548f96deed51b6e5c49ed8c0dd243576783bc3 1882
10 dc2f910b629506c65f8470b570cd4a1462faffca https://github.com/ukui/ukui-sidebar ukui_ukui-sidebar ukui/ukui-sidebar 7587535a6b732f08619ca365d610631a466e2197 2152
11 5bc8c3b3c2270fdc6e6ec8717e215119738194d9 https://github.com/wojtekka/6tunnel wojtekka_6tunnel wojtekka/6tunnel fdb3a3265fab6e403a7525071e0e161ff73e25bb 2411
12 12b4c8437580257d967f2d7b20809f62f9b0e6c2 https://github.com/chrys87/simple-orca-plugin-system.git chrys87_simple-orca-plugin-system.git chrys87/simple-orca-plugin-system.git 56f1d2db1b7b0fdff0312ff8199bb885f3f93a3d 2656
13 8e1efea2ea829e646bd33841e720244dc5dc4918 https://github.com/kjn/lbzip2 kjn_lbzip2 kjn/lbzip2 7c905684817019dada92fb5e4e09b23a2937927a 2785
14 b8fa28b5dd27eafd44f2734ea9cb495a3cdf2e07 https://github.com/nicotine-plus/nicotine-plus nicotine-plus_nicotine-plus nicotine-plus/nicotine-plus e9fc10c461deb62603cab6368ba5e82457ad876e 2889
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17 5a309dc17ca4aff0c660dce37ab43581bf3b2a0b https://github.com/jnwatson/py-lmdb jnwatson_py-lmdb jnwatson/py-lmdb c7591acf9498d7bf1d4dbd7b22d96afd6370696b 3530
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19 8071b12616dd5c063e38d9addcfced58df058192 https://github.com/ClusterLabs/crmsh ClusterLabs_crmsh ClusterLabs/crmsh 20c6e4996ff89ddc9fbd3c52c97ef85ece250e60 3866
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