Changing to Rtex

new_knitr_document

@@ -16,7 +16,7 @@ then
     # get rid of paper_template subdir
     mv "$TMPDIR" "$1"
     cd "$1";
-    mv "text.Rnw" "$1.Rnw"
+    mv "text.Rtex" "$1.Rtex"
 else
     echo "specifiy a directory where the template should go";
 fi

paper_template/Makefile

@@ -1,10 +1,8 @@
 #!/usr/bin/make
 
-all: $(patsubst %.Rnw,%.pdf,$(wildcard *.Rnw)) 
+all: $(patsubst %.Rtex,%.pdf,$(wildcard *.Rtex)) 
 
-# use the following section for Rnw/knitr documents
-# all: $(patsubst %.Rnw,%.pdf,$(wildcard *.Rnw))
-%.tex: %.Rnw
+%.tex: %.Rtex
 	Rscript -e "library(knitr); knit('$<')"
 
 %.pdf: %.tex 
@@ -15,7 +13,7 @@ clean:
 	rm -f *.tmp *.run.xml
 	rm -f vc
 	rm -f *.bbl
-	# the following lines are useful for Rnw/knitr
+	# the following lines are useful for Rtex/knitr
 	rm -rf cache/ figure/
 	rm -f *.tex